Journal: Kidney360
Article Title: AMPK-SP1–Guided Dynein Expression Represents a New Energy-Responsive Mechanism and Therapeutic Target for Diabetic Nephropathy
doi: 10.34067/KID.0000000000000392
Figure Lengend Snippet: Hyperglycemia induces dynein gene expression via an AMPK/SP1-dependent mechanism. (A) Hyperglycemia-responsive dynein genes share binding motif for SP1 TF. SP1 binding motifs (red) identified in genes encoding mouse dynein subunits, using SwissRegulon tools. The promoter sequences for each individual dynein gene and their GenBank locations are highlighted in orange. ChIP primers (gray) were designed close to the SP1 binding motif and the translation starting sites (blue). (B) Workflow of crosslinking SP1 ChIP. (C) Hypothesis and research design of hyperglycemia-induced dynein gene expression via an AMPK/SP1 axis. Hyperglycemia suppresses AMPK and disinhibits SP1, which subsequently initiates the transcription of dynein subunits. (D) The fold enrichment (=2 (Ct IgG−Ct SP1) ) of dynein gene locus sequences immunoprecipitated with SP1 was quantified by ChIP-qPCR. The values were normalized to that of NG. The PCR products were confirmed by running an agarose gel. (E) SP1 activity reflected by the nuclear location of phosphorylated SP1 in podocytes with different treatments, related to the unchanged total SP1 (NG; HG; CC, an AMPK inhibitor; AICAR: an AMPK agonist). Medium containing 0.3% DMSO served as a negative control for chemical intervention. (F) Relative quantification of dynein gene transcription using Gapdh as a housekeeping gene was normalized to that of NG and was compared in a heatmap. (G) Protein levels of representative dynein subunits in podocytes with different treatments were examined using Western blot. The corresponding AMPK activity was expressed as the Thr 172 phosphorylated to total AMPK ratio (AMPK-p/AMPK). The log OD values against the β -actin housekeeping protein were normalized to that of NG. n =3, * P < 0.05 versus NG; ^ P < 0.05 SP1 siRNA versus control siRNA. AICAR, 5-aminoimidazole-4-carboxamide ribonucleoside; AMPK, AMP-activated protein kinase; CC, compound C; ChIP, chromatin immunoprecipitation; HG, high glucose; NG, normal glucose; OD, optical density; qPCR, quantitative PCR; siRNA, small interfering RNA; SP1, specificity protein 1; TF, transcription factor.
Article Snippet: Primary human podocytes were purchased from Celprogen Biotechnology Company (Celprogen 36036-08), cultured in precoated flasks with Human Podocyte Cell Culture Extracellular Matrix (Celprogen E36036-08) and maintained in complete medium with serum (M36036).
Techniques: Expressing, Binding Assay, Immunoprecipitation, Agarose Gel Electrophoresis, Activity Assay, Negative Control, Western Blot, Chromatin Immunoprecipitation, Real-time Polymerase Chain Reaction, Small Interfering RNA